ncRNA ID | novel_egu_miR248 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr8:19265417-19265525 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 19 |
Mature sequence(if miRNA) | 91 - AGAUAAUCUGAUUGUCUAG - 109 |
Stem-loop(if miRNA) |
--  GU           -ACUA    UUUCGUUAUUUUCAC           C        U   AG  AAUCAGAUUAU     UUUG               AGGUAAUGCUG AUUAUAUG A   ||  |||||||||||     ||||               ||||||||||| |||||||| A   UC  UUAGUCUAAUA     AAAC               UCCAUUACGAC UAAUGUAC U GA  UG           GAAAA    ---------------           A        A |
Stem-loop sequence | AGGUAAUCAGAUUAUACUAUUUGUUUCGUUAUUUUCACAGGUAAUGCUGCAUUAUAUGUAAUACAUGUAAUACAGCAUUACCUCAAAAAAAGAUAAUCUGAUUGUCUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019849620.1 |
|
0.0 | PREDICTED: Elaeis guineensis syntaxin-112 (LOC105041904), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010918973.2 |
|
0.0 | PREDICTED: Elaeis guineensis syntaxin-112 (LOC105041904), transcript variant X4, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_019849621.1 |
|
0.0 | PREDICTED: Elaeis guineensis syntaxin-112 (LOC105041904), transcript variant X3, mRNA | NA | coding protein | psRNATarget |