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BaseInfo

ncRNA ID novel_egu_miR248
Species Elaeis guineensis
Class miRNA
Genome position Chr8:19265417-19265525 [+]
Reference genome EG5
Source SRR5189967
Length 19
Mature sequence(if miRNA) 91 - AGAUAAUCUGAUUGUCUAG - 109
Stem-loop(if miRNA) --  GU           -ACUA    UUUCGUUAUUUUCAC           C        U
  AG  AAUCAGAUUAU     UUUG               AGGUAAUGCUG AUUAUAUG A
  ||  |||||||||||     ||||               ||||||||||| |||||||| A
  UC  UUAGUCUAAUA     AAAC               UCCAUUACGAC UAAUGUAC U
GA  UG           GAAAA    ---------------           A        A
Stem-loop sequence AGGUAAUCAGAUUAUACUAUUUGUUUCGUUAUUUUCACAGGUAAUGCUGCAUUAUAUGUAAUACAUGUAAUACAGCAUUACCUCAAAAAAAGAUAAUCUGAUUGUCUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019849620.1
ncRNA:19   GAUCUGUUAGUCUAAUAGA   1
  |||||||||||||||||||
targets:5   CUAGACAAUCAGAUUAUCU   23

0.0 PREDICTED: Elaeis guineensis syntaxin-112 (LOC105041904), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010918973.2
ncRNA:19   GAUCUGUUAGUCUAAUAGA   1
  |||||||||||||||||||
targets:5   CUAGACAAUCAGAUUAUCU   23

0.0 PREDICTED: Elaeis guineensis syntaxin-112 (LOC105041904), transcript variant X4, mRNA NA coding protein psRNATarget
XM_019849621.1
ncRNA:19   GAUCUGUUAGUCUAAUAGA   1
  |||||||||||||||||||
targets:5   CUAGACAAUCAGAUUAUCU   23

0.0 PREDICTED: Elaeis guineensis syntaxin-112 (LOC105041904), transcript variant X3, mRNA NA coding protein psRNATarget