Search result

BaseInfo

ncRNA ID novel_egu_miR246
Species Elaeis guineensis
Class miRNA
Genome position Chr11:11117564-11117613 [+]
Reference genome EG5
Source SRR5189967
Length 22
Mature sequence(if miRNA) 1 - UUUUUAAAAGCGUCGGUAGGUC - 22
Stem-loop(if miRNA) -     A    C          CA
 UUUUU AAAG GUCGGUAGGU  G
 ||||| |||| ||||||||||  U
 GAAAA UUUC CAGCCGUCCA  G
C     C    A          AC
Stem-loop sequence UUUUUAAAAGCGUCGGUAGGUCAGUGCAACCUGCCGACACUUUCAAAAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010945667.1
ncRNA:22   CUGGAUGGCUGCGAAAAUUUUU   1
  |||||=|||||||||||||||=
targets:367   GACCUGCCGACGCUUUUAAAAG   388

2.0 PREDICTED: Elaeis guineensis pathogenesis-related protein PRB1-3-like (LOC105061570), mRNA NA coding protein psRNATarget