ncRNA ID | novel_egu_miR242 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr8:26212891-26213069 [-] |
Reference genome | EG5 |
Source | SRR5189967;SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAGGAUUGCAACAGGAUGUCAUA - 24 |
Stem-loop(if miRNA) |
--         U  A  --               AUAAUUU            --CAA             UAUUGC    A   A          UGGCAUUCU UU GU  UUUUAUGACAUCCUG       UUUUAUAAAAUG     CAGGAUAUUAUAG      AACA AAU UCAUAAUA   ||||||||| || ||  |||||||||||||||       ||||||||||||     |||||||||||||      |||| ||| |||||||U   ACUGUAGGA AA CG  AGGAUACUGUGGGAU       AGAAUAUUUUAU     GUUUUAUAGUAUU      UUGU UUA AGUAUUAU AU         C  -  UU               --AACGU            UAAUA             -UUUAA    C   C        |
Stem-loop sequence | UGGCAUUCUUUUAGUUUUUAUGACAUCCUGAUAAUUUUUUUAUAAAAUGCAACAGGAUAUUAUAGUAUUGCAACAAAAUAUCAUAAUAUUAUUAUGACAUUCUGUUAAUUUUUAUGAUAUUUUGAUAAUUAUUUUAUAAGAUGCAAUAGGGUGUCAUAGGAUUGCAACAGGAUGUCAUA |