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BaseInfo

ncRNA ID novel_egu_miR242
Species Elaeis guineensis
Class miRNA
Genome position Chr8:26212891-26213069 [-]
Reference genome EG5
Source SRR5189967;SRR3042542
Length 24
Mature sequence(if miRNA) 1 - AUAGGAUUGCAACAGGAUGUCAUA - 24
Stem-loop(if miRNA) --         U  A  --               AUAAUUU            --CAA             UAUUGC    A   A       
  UGGCAUUCU UU GU  UUUUAUGACAUCCUG       UUUUAUAAAAUG     CAGGAUAUUAUAG      AACA AAU UCAUAAUA
  ||||||||| || ||  |||||||||||||||       ||||||||||||     |||||||||||||      |||| ||| |||||||U
  ACUGUAGGA AA CG  AGGAUACUGUGGGAU       AGAAUAUUUUAU     GUUUUAUAGUAUU      UUGU UUA AGUAUUAU
AU         C  -  UU               --AACGU            UAAUA             -UUUAA    C   C       
Stem-loop sequence UGGCAUUCUUUUAGUUUUUAUGACAUCCUGAUAAUUUUUUUAUAAAAUGCAACAGGAUAUUAUAGUAUUGCAACAAAAUAUCAUAAUAUUAUUAUGACAUUCUGUUAAUUUUUAUGAUAUUUUGAUAAUUAUUUUAUAAGAUGCAAUAGGGUGUCAUAGGAUUGCAACAGGAUGUCAUA