Search result

BaseInfo

ncRNA ID	novel_egu_miR240
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr7:32443004-32443096 [+]
Reference genome	EG5
Source	SRR5189967
Length	21
Mature sequence(if miRNA)	1 - AGGAUACAUGUAUUUGGCUAU - 21
Stem-loop(if miRNA)	--     A  UG         A ---G     GAU   GAUA   AAA   AGGAU CA  UAUUUGGCU U    GAUGG   CUC    UAA   G   ||||| ||  ||||||||| |    |||||   |||    |||   A   UUUUG GU  GUAGAUUGA A    CUACU   GAG    AUU   U UA     A  CA         A AUGA     -AU   AUAG   AGU
Stem-loop sequence	AGGAUACAUGUAUUUGGCUAUGGAUGGGAUCUCGAUAUAAAAAGAUUGAUUAGAUAGAGUAUCAUCAGUAAAAGUUAGAUGACUGAGUUUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019847047.1	ncRNA:21   UAUCGGUUUAUGUACAUAGGA   1   |*|||||*||||=|||||||| targets:2196   AAAGCCACAUACGUGUAUCCU   2216 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis protein downstream neighbor of Son (LOC105034640), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019847050.1	ncRNA:21   UAUCGGUUUAUGUACAUAGGA   1   |*|||||*||||=|||||||| targets:2423   AAAGCCACAUACGUGUAUCCU   2443 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis protein downstream neighbor of Son (LOC105034640), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_010909861.2	ncRNA:21   UAUCGGUUUAUGUACAUAGGA   1   |*|||||*||||=|||||||| targets:2426   AAAGCCACAUACGUGUAUCCU   2446 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis protein downstream neighbor of Son (LOC105034640), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_019847049.1	ncRNA:21   UAUCGGUUUAUGUACAUAGGA   1   |*|||||*||||=|||||||| targets:2426   AAAGCCACAUACGUGUAUCCU   2446 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis protein downstream neighbor of Son (LOC105034640), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_019847048.1	ncRNA:21   UAUCGGUUUAUGUACAUAGGA   1   |*|||||*||||=|||||||| targets:2429   AAAGCCACAUACGUGUAUCCU   2449 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis protein downstream neighbor of Son (LOC105034640), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010909860.2	ncRNA:21   UAUCGGUUUAUGUACAUAGGA   1   |*|||||*||||=|||||||| targets:2432   AAAGCCACAUACGUGUAUCCU   2452 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis protein downstream neighbor of Son (LOC105034640), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010909859.2	ncRNA:21   UAUCGGUUUAUGUACAUAGGA   1   |*|||||*||||=|||||||| targets:2435   AAAGCCACAUACGUGUAUCCU   2455 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis protein downstream neighbor of Son (LOC105034640), transcript variant X1, mRNA	NA	coding protein	psRNATarget