ncRNA ID | novel_egu_miR222 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr6:20194296-20194469 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAUACUGUGCAUAUUUUGAGAU - 24 |
Stem-loop(if miRNA) |
--AGAAUAC            -    UA           --A    UGGUUGUGUAAUGUUUAUCUAAACUAUUCAAAUACCCCUAGA          UGUGCAUAUUUU GAGA  UCCAUUAAAAG   UGGG                                          G          |||||||||||| ||||  |||||||||||   ||||                                          U          ACAUGUAUAAAA CUCU  AGGUAGUUUUU   UGCG                                          U CAUUCGAUA            U    GC           ACC    ACUGUGUGCGUACAAUUUUAUAAUUUUUUUUUCUUUACUUAU |
Stem-loop sequence | AGAAUACUGUGCAUAUUUUGAGAUAUCCAUUAAAAGAUGGGUGGUUGUGUAAUGUUUAUCUAAACUAUUCAAAUACCCCUAGAGUUUAUUCAUUUCUUUUUUUUUAAUAUUUUAACAUGCGUGUGUCAGCGUCCAUUUUUGAUGGACGUCUCUAAAAUAUGUACAAUAGCUUAC |