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BaseInfo

ncRNA ID	novel_egu_miR221
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr6:18042526-18042607 [+]
Reference genome	EG5
Source	SRR5189967;SRR3042542;SRR3042545;SRR3042547;SRR3042548;SRR5189964
Length	21
Mature sequence(if miRNA)	62 - UUGAGCCGCGUCAAUAUCUCC - 82
Stem-loop(if miRNA)	--             C       UG AA         CAUG   AGGUAUUGGCGUG CUCAAUC  A  GCAUGGUUA    C   ||||||||||||| |||||||  |  |||||||||   UCUAUAACUGCGC GAGUUAG  U  UGUACCGAU    U CC             C       GU AA         AAAC
Stem-loop sequence	AGGUAUUGGCGUGCCUCAAUCUGAAAGCAUGGUUACAUGCUCAAAUAGCCAUGUAAUUGGAUUGAGCCGCGUCAAUAUCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JO095208.1	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:9   UGGGAUAUUGGCGCGGCUCAA   29 Target Full Sequence	2.5	TSA: Elaeis guineensis isotig07977.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
XM_010942830.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1724   UGGGAUAUUGGCGCGGCUCAA   1744 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis scarecrow-like protein 27 (LOC105059511), mRNA	NA	coding protein	psRNATarget
XM_010935381.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1830   UGGGAUAUUGGCGCGGCUCAA   1850 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis scarecrow-like protein 22 (LOC105054013), mRNA	NA	coding protein	psRNATarget
XM_010936668.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1805   UGGGAUAUUGGCGCGGCUCAA   1825 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis scarecrow-like protein 27 (LOC105054987), mRNA	NA	coding protein	psRNATarget
XM_010921230.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1861   UGGGAUAUUGGCGCGGCUCAA   1881 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis scarecrow-like protein 22 (LOC105043623), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010921232.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1861   UGGGAUAUUGGCGCGGCUCAA   1881 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis scarecrow-like protein 22 (LOC105043623), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010921231.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|=|||||||=|||||||||| targets:1861   UGGGAUAUUGGCGCGGCUCAA   1881 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis scarecrow-like protein 22 (LOC105043623), transcript variant X2, mRNA	NA	coding protein	psRNATarget
GBSV01009295.1	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|*|||||||=|||||||||| targets:94   CGCGAUAUUGGCGCGGCUCAA   114 Target Full Sequence	2.5	TSA: Elaeis guineensis CL3243.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01039526.1	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   ***|||||||=|||||||||| targets:310   CACGAUAUUGGCGCGGCUCAA   330 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene21363_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010944875.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   *|*|||||||=|||||||||| targets:780   CGCGAUAUUGGCGCGGCUCAA   800 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis scarecrow-like protein 15 (LOC105060969), mRNA	NA	coding protein	psRNATarget
XM_010906778.2	ncRNA:21   CCUCUAUAACUGCGCCGAGUU   1   ***|||||||=|||||||||| targets:709   CACGAUAUUGGCGCGGCUCAA   729 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis scarecrow-like protein 15 (LOC105032345), mRNA	NA	coding protein	psRNATarget