ncRNA ID | novel_egu_miR214 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr6:23883599-23883732 [-] |
Reference genome | EG5 |
Source | SRR5189967;SRR3042542;SRR3042544;SRR5189964 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUAAGCAACAACUCGAAGAUU - 21 |
Stem-loop(if miRNA) |
--    -      -AA        U       ---    AGA    AA     A   CUUUAUCAACCACUG   UCUU GAGUUG   CUUAAUUU AUAGUAU   AGCA   AGUA  ACUCC UAG               A   |||| ||||||   |||||||| |||||||   ||||   ||||  ||||| |||   AGAA CUCAAC   GAAUUAGA UAUCAUA   UCGU   UUAU  UGAGG GCG               G UU    G      AAC        -       AAC    --A    --     G   UCGUUGUAUAAAUCG |
Stem-loop sequence | UCUUGAGUUGAACUUAAUUUUAUAGUAUAGCAAGAAGUAAAACUCCAUAGCUUUAUCAACCACUGAGGCUAAAUAUGUUGCUGCGGGGAGUUAUUAUGCUCAAAUACUAUAGAUUAAGCAACAACUCGAAGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01031789.1 |
|
0.0 | TSA: Elaeis guineensis Unigene13622_All transcribed RNA sequence | NA | coding protein | psRNATarget |