ncRNA ID | novel_egu_miR212 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:9213349-9213434 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACUUCAUGUGAGAGAGAAUUGG - 24 |
Stem-loop(if miRNA) |
--        -       -       GGGUG        UU    GU   AAACUUCA UGUGAGA GAGAAUU     UACAAGGG  GAGG  G   |||||||| ||||||| |||||||     ||||||||  ||||   UUUGAAGU AUACUUU CUUUUAA     AUGUUCUC  CUCU  A CG        G       U       ----A        --    GG |
Stem-loop sequence | AAACUUCAUGUGAGAGAGAAUUGGGUGUACAAGGGUUGAGGGUGAGGUCUCCUCUUGUAAAAUUUUCUUUUCAUAGUGAAGUUUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01017255.1 |
|
2.5 | TSA: Elaeis guineensis CL6532.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01023798.1 |
|
2.5 | TSA: Elaeis guineensis Unigene5627_All transcribed RNA sequence | NA | coding protein | psRNATarget |