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BaseInfo

ncRNA ID novel_egu_miR212
Species Elaeis guineensis
Class miRNA
Genome position Chr11:9213349-9213434 [+]
Reference genome EG5
Source SRR5189967
Length 24
Mature sequence(if miRNA) 1 - AAACUUCAUGUGAGAGAGAAUUGG - 24
Stem-loop(if miRNA) --        -       -       GGGUG        UU    GU
  AAACUUCA UGUGAGA GAGAAUU     UACAAGGG  GAGG  G
  |||||||| ||||||| |||||||     ||||||||  ||||
  UUUGAAGU AUACUUU CUUUUAA     AUGUUCUC  CUCU  A
CG        G       U       ----A        --    GG
Stem-loop sequence AAACUUCAUGUGAGAGAGAAUUGGGUGUACAAGGGUUGAGGGUGAGGUCUCCUCUUGUAAAAUUUUCUUUUCAUAGUGAAGUUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01017255.1
ncRNA:24   GGUUAAGAGAGAGUGUACUUCAAA   1
  |||||||||||||||*|||||||*
targets:841   CCAAUUCUCUCUCACCUGAAGUUC   864

2.5 TSA: Elaeis guineensis CL6532.Contig1_All transcribed RNA sequence NA coding protein psRNATarget
GBSV01023798.1
ncRNA:24   GGUU-AAGAGAGAGUGUACUUCAAA   1
  *|||-||||||||||||||*||||*
targets:408   ACAACUUCUCUCUCACAUGCAGUUG   432

2.5 TSA: Elaeis guineensis Unigene5627_All transcribed RNA sequence NA coding protein psRNATarget