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BaseInfo

ncRNA ID	novel_egu_miR200
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr11:8878851-8878944 [+]
Reference genome	EG5
Source	SRR5189967
Length	19
Mature sequence(if miRNA)	76 - UGCUGUCAUCUGGGGCAUG - 94
Stem-loop(if miRNA)	U     - AAUGAUGGACCUGUAACAAAUAGAUCAGACCACUCAAA  GGAUC C                                      U  ||||| |                                      G  UACGG G                                      A G     G UCUACUGUCGUGGUCUAGGUUCAACUGUAGUACUGAGA
Stem-loop sequence	UGGAUCCAAUGAUGGACCUGUAACAAAUAGAUCAGACCACUCAAAUGAAGAGUCAUGAUGUCAACUUGGAUCUGGUGCUGUCAUCUGGGGCAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019853291.1	ncRNA:19   GUACGGGGUCUACUGUCGU   1   |||||||||||||||||=| targets:404   CAUGCCCCAGAUGACAGUA   422 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis uncharacterized LOC105053211 (LOC105053211), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010934297.2	ncRNA:19   GUACGGGGUCUACUGUCGU   1   |||||||||||||||||=| targets:535   CAUGCCCCAGAUGACAGUA   553 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis uncharacterized LOC105053211 (LOC105053211), transcript variant X2, mRNA	NA	coding protein	psRNATarget
GBSV01047520.1	ncRNA:19   GUACGGGGUCUACUGUCGU   1   *|||*|||||||||||||| targets:491   GAUGGCCCAGAUGACAGCA   509 Target Full Sequence	2.0	TSA: Elaeis guineensis Unigene29361_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_019850760.1	ncRNA:19   GUACGGGGUCUACUGUCGU   1   *|||*|||||||||||||| targets:597   GAUGGCCCAGAUGACAGCA   615 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis E3 ubiquitin-protein ligase SHPRH (LOC105044839), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010922867.1	ncRNA:19   GUACGGGGUCUACUGUCGU   1   *|||*|||||||||||||| targets:597   GAUGGCCCAGAUGACAGCA   615 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis E3 ubiquitin-protein ligase SHPRH (LOC105044839), transcript variant X1, mRNA	NA	coding protein	psRNATarget