ncRNA ID | novel_egu_miR194 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr5:44723491-44723590 [-] |
Reference genome | EG5 |
Source | SRR5189967;SRR3042542;SRR3042547;SRR5189964 |
Length | 21 |
Mature sequence(if miRNA) | 80 - AAGCUCAGGAGGGAUAGCGCC - 100 |
Stem-loop(if miRNA) |
--          G         CA       ---U    --AG   -AC  CA   AAGCUCAGGA GGAUAGCGC  UGGAUGA    AACA    GGG   CG  A   |||||||||| |||||||||  |||||||    ||||    |||   ||   UUUGAGUCCU UCUAUCGCG  AUCUACU    UUGU    CUC   GC  A AU          A         UA       UGCC    AAAA   GAA  AG |
Stem-loop sequence | AAGCUCAGGAGGGAUAGCGCCAUGGAUGAUAACAAGGGGACCGCAAAGACGAAGCUCAAAAUGUUCCGUUCAUCUAAUGCGCUAUCUAUCCUGAGUUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010942161.2 |
|
2.5 | PREDICTED: Elaeis guineensis probable LRR receptor-like serine/threonine-protein kinase At1g63430 (LOC105059029), mRNA | NA | coding protein | psRNATarget | |||||||||
GBSV01030049.1 |
|
2.5 | TSA: Elaeis guineensis Unigene11882_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010906573.2 |
|
2.5 | PREDICTED: Elaeis guineensis aspartyl protease family protein 2-like (LOC105032195), mRNA | NA | coding protein | psRNATarget |