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BaseInfo

ncRNA ID	ath-miRf10868-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - ACUCGACCACGAGGUCGAGUAG - NA
Stem-loop(if miRNA)	AAC         A           A AAG    AAG     A  --AGA    -    ----  CCCUGGUCGAGUAGGGGACUUCAUAAUUUCAUCUCGUUUUACGAUUUGAGUCG GUCA   CACUCGACC CGAGGUCGAGU G   CUUC   ACCUC AC     CCAC UCGA    CC                                                     G ||||   ||||||||| ||||||||||| |   ||||   ||||| ||     |||| ||||    || UAGU   GUGAGCUGG GCUCCAGCUCA C   GAAG   UGGAG UG     CUGG AGUG    AG                                                     C     GUA         A           - --A    ---     G  GUGGA    U    AGCU  UGCAGUGAGAUGGAACUUCAGCUCAUAGAAGUAGUGGUGACAAUUUACGGCUC
Stem-loop sequence	GUCAAACCACUCGACCACGAGGUCGAGUAGAAGCUUCAAGACCUCAACAGACCACUCGACCCCCUGGUCGAGUAGGGGACUUCAUAAUUUCAUCUCGUUUUACGAUUUGAGUCGGCCUCGGCAUUUAACAGUGGUGAUGAAGAUACUCGACUUCAAGGUAGAGUGACGUGAUCGAGUGAUGGUCAGGUGGUGGAGGUGAAGACACUCGACCUCGAGGUCGAGUGAUGUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183311.1	ncRNA:22   GAUGAGCUGGAGCACCAGCUCA   1   *|||||||*||||||||||||| targets:578   GUACUCGAGCUCGUGGUCGAGU   599 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:22   GAUGAGCUGGAGCACCAGCUCA   1   ||||||||||||*||||||||| targets:2014   CUACUCGACCUCUUGGUCGAGU   2035 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:22   GAUGAGCUGGAGCACCAGCUCA   1   **|||||||||||*|||||||| targets:1864   GCACUCGACCUCGAGGUCGAGU   1885 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:22   GAUGAGCUGGAGCACCAGCUCA   1   |*||||||||*||||||||||| targets:489   CCACUCGACCCCGUGGUCGAGU   510 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:22   GAUGAGCUGGAGCACCAGCUCA   1   |*||||||||*||||||||||| targets:1209   CCACUCGACCCCGUGGUCGAGU   1230 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY231407.1	ncRNA:22   GAUGAGCUGGAGCACCAGCUCA   1   ||||||*|||*||||||||||| targets:642   CUACUCAACCACGUGGUCGAGU   663 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget