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BaseInfo

ncRNA ID	novel_egu_miR187
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr4:15243272-15243350 [+]
Reference genome	EG5
Source	SRR5189967
Length	24
Mature sequence(if miRNA)	1 - AGAAAGAUCAAGGAAGAAGAAGGA - 24
Stem-loop(if miRNA)	--         AA          GGA        UU  U     AGAAAGAUC  GGAAGAAGAA   UCUUCUUU  AG GCG   |||||||||  ||||||||||   ||||||||  || ||C   UCUUUUUAG  UCUUCUUUUU   GGAAGAAG  UC CGA CU         -A          -GA        -U  -
Stem-loop sequence	AGAAAGAUCAAGGAAGAAGAAGGAUCUUCUUUUUAGUGCGCAGCCUUGAAGAAGGAGUUUUUCUUCUAGAUUUUUCUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01016006.1	ncRNA:24   AGGAAGAAGAAGGAACUAGAAAGA   1   |=||||*||||||||||||*|||| targets:711   UUCUUCCUCUUCCUUGAUCCUUCU   734 Target Full Sequence	2.5	TSA: Elaeis guineensis CL5969.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01016005.1	ncRNA:24   AGGAAGAAGAAGGAACUAGAAAGA   1   |=||||*||||||||||||*|||| targets:562   UUCUUCCUCUUCCUUGAUCCUUCU   585 Target Full Sequence	2.5	TSA: Elaeis guineensis CL5969.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010920045.2	ncRNA:24   AG-GA---AGAAGAAGGAACUAGAAAGA   1   ||-||---||||=|||||||||=||||| targets:3384   UCACUCGCUCUUUUUCCUUGAUUUUUCU   3411 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic (LOC105042742), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01011175.1	ncRNA:24   AG-GA---AGAAGAAGGAACUAGAAAGA   1   ||-||---||||=|||||||||=||||| targets:2036   UCACUCGCUCUUUUUCCUUGAUUUUUCU   2063 Target Full Sequence	2.5	TSA: Elaeis guineensis CL3988.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget