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BaseInfo

ncRNA ID	novel_egu_miR180
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr4:6733775-6733858 [+]
Reference genome	EG5
Source	SRR5189967;SRR3042544;SRR3042545;SRR3042542;SRR3042548;SRR5189964
Length	21
Mature sequence(if miRNA)	64 - UGAUUGAGCCGUGCCAAUAUC - 84
Stem-loop(if miRNA)	--       C       C      A   -CUC    G  AAC   UGUUGGC CGGUUCA UCAGAA GCA    CUAG GC   A   ||||||| ||||||| |||||| |||    |||| ||   C   AUAACCG GCCGAGU AGUCUU CGU    GAUU CG   G CU       U       U      G   UCUA    G  GAA
Stem-loop sequence	UGUUGGCCCGGUUCACUCAGAAAGCACUCCUAGGGCAACACGAAGGCGUUAGAUCUUGCGUUCUGAUUGAGCCGUGCCAAUAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01039526.1	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:313   GAUAUUGGCGCGGCUCAAUCA   333 Target Full Sequence	1.5	TSA: Elaeis guineensis Unigene21363_All transcribed RNA sequence	NA	coding protein	psRNATarget
JO095208.1	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:12   GAUAUUGGCGCGGCUCAAUCA   32 Target Full Sequence	1.5	TSA: Elaeis guineensis isotig07977.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
GBSV01009295.1	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:97   GAUAUUGGCGCGGCUCAAUCA   117 Target Full Sequence	1.5	TSA: Elaeis guineensis CL3243.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010906778.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:712   GAUAUUGGCGCGGCUCAAUCA   732 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis scarecrow-like protein 15 (LOC105032345), mRNA	NA	coding protein	psRNATarget
XM_010944875.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:783   GAUAUUGGCGCGGCUCAAUCA   803 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis scarecrow-like protein 15 (LOC105060969), mRNA	NA	coding protein	psRNATarget
XM_010942830.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1727   GAUAUUGGCGCGGCUCAAUCA   1747 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis scarecrow-like protein 27 (LOC105059511), mRNA	NA	coding protein	psRNATarget
XM_010935381.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1833   GAUAUUGGCGCGGCUCAAUCA   1853 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis scarecrow-like protein 22 (LOC105054013), mRNA	NA	coding protein	psRNATarget
XM_010936668.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1808   GAUAUUGGCGCGGCUCAAUCA   1828 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis scarecrow-like protein 27 (LOC105054987), mRNA	NA	coding protein	psRNATarget
XM_010921230.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1864   GAUAUUGGCGCGGCUCAAUCA   1884 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis scarecrow-like protein 22 (LOC105043623), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010921232.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1864   GAUAUUGGCGCGGCUCAAUCA   1884 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis scarecrow-like protein 22 (LOC105043623), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010921231.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1864   GAUAUUGGCGCGGCUCAAUCA   1884 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis scarecrow-like protein 22 (LOC105043623), transcript variant X2, mRNA	NA	coding protein	psRNATarget