Search result

BaseInfo

ncRNA ID novel_egu_miR176
Species Elaeis guineensis
Class miRNA
Genome position Chr1:36715576-36715769 [-]
Reference genome EG5
Source SRR3042542;SRR3042545;SRR3042547
Length 24
Mature sequence(if miRNA) 1 - AAGCAGUUUUGAGAUAGUAGAUCA - 24
Stem-loop(if miRNA) --        C                  C       C          AAAAC UA          A       -       A  U  UUAAUUCAAU
  AUCUACUA CUUAAAACUGCUUGUACA AAAAAGU AUAUGAUUUG     C  UAGCUUAUGC UCAAGUA UUAAAAA UA AU          U
  |||||||| |||||||||||||||||| ||||||| ||||||||||     |  |||||||||| ||||||| ||||||| || ||
  UAGAUGAU GAGUUUUGACGAAUGUGU UUUUUUA UAUACUAAAC     G  AUCGGAUACG AGUUCAU AAUUUUU AU UG          U
AC        A                  A       A          CUCUA GC          -       C       A  C  UCAGCUUUAU
Stem-loop sequence AUCUACUACCUUAAAACUGCUUGUACACAAAAAGUCAUAUGAUUUGAAAACCUAUAGCUUAUGCAUCAAGUAUUAAAAAAUAUAUUUAAUUCAAUUUUAUUUCGACUGUCUAAUUUUUAACUACUUGAGCAUAGGCUACGGAUCUCCAAAUCAUAUAAUUUUUUAUGUGUAAGCAGUUUUGAGAUAGUAGAUCA