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BaseInfo

ncRNA ID novel_egu_miR175
Species Elaeis guineensis
Class miRNA
Genome position Chr4:41276461-41276531 [-]
Reference genome EG5
Source SRR5189967;SRR3042544;SRR3042542;SRR3042545;SRR3042547;SRR3042548
Length 21
Mature sequence(if miRNA) 1 - CGAGCCGAACCAAUAUCACUC - 21
Stem-loop(if miRNA) --          C       AU  -      AUUUU
  GUGAUAUUGG UCGGCUC  CU GUUUUC     A
  |||||||||| |||||||  || ||||||
  CACUAUAACC AGCCGAG  GA UAGAAG     G
CU          A       CG  G      ACUUA
Stem-loop sequence GUGAUAUUGGCUCGGCUCAUCUGUUUUCAUUUUAGAUUCAGAAGAUGAGGCGAGCCGAACCAAUAUCACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010918519.1
ncRNA:21   CUCACUAUAACCAAGCCGAGC   1
  |=||||||||||||||||||*
targets:476   GGGUGAUAUUGGUUCGGCUCA   496

1.0 PREDICTED: Elaeis guineensis nodulation-signaling pathway 2 protein-like (LOC105041575), mRNA NA coding protein psRNATarget
XM_010928230.2
ncRNA:21   CUCACUAUAACCAAGCCGAGC   1
  |=||||||||||||||||||*
targets:407   GGGUGAUAUUGGUUCGGCUCA   427

1.0 PREDICTED: Elaeis guineensis nodulation-signaling pathway 2 protein-like (LOC105048783), mRNA NA coding protein psRNATarget