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BaseInfo

ncRNA ID	novel_egu_miR165
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:36715997-36716191 [-]
Reference genome	EG5
Source	SRR3042542;SRR3042547
Length	24
Mature sequence(if miRNA)	1 - AAGCAGUUUUGAGGUAGUAGAUCA - 24
Stem-loop(if miRNA)	--AUA               A         U     U          A    UC  G   U   A       CGACUAAAAAAUAUA   AAUUUAAUUUUAUU      UACUAUCUCGAAACU UUUGUAUAU AAAAA CAUAUGAUUU AAGA  CU AGC UAU CAUCAAG               UCU              U      ||||||||||||||| ||||||||| ||||| |||||||||| ||||  || ||| ||| |||||||               |||              A      AUGAUGGAGUUUUGA GAACAUGUA UUUUU GUAUAUUAAA UUCU  GA UCG AUA GUAGUUU               CAG              G ACUAG               C         C     -          C    GA  A   U   C       -------------AU   UUUUUAAUCUGUCG
Stem-loop sequence	AUAUACUAUCUCGAAACUAUUUGUAUAUUAAAAAUCAUAUGAUUUAAAGAUCCUGAGCUUAUACAUCAAGCGACUAAAAAAUAUAUCUAAUUUAAUUUUAUUUAGGCUGUCUAAUUUUUGACUAUUUGAUGCAUAUGCUAAGAGUCUUCAAAUUAUAUGUUUUUCAUGUACAAGCAGUUUUGAGGUAGUAGAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019847239.1	ncRNA:24   ACUAGAUGAUGGAGUUUUGACGAA   1   |||||||||=||||||||||*||| targets:3508   UGAUCUACUGCCUCAAAACUACUU   3531 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019847213.1	ncRNA:24   ACUAGAUGAUGGAGUUUUGACGAA   1   |||||||||=||||||||||*||| targets:3981   UGAUCUACUGCCUCAAAACUACUU   4004 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019847185.1	ncRNA:24   ACUAGAUGAUGGAGUUUUGACGAA   1   |||||||||=||||||||||*||| targets:3984   UGAUCUACUGCCUCAAAACUACUU   4007 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X1, mRNA	NA	coding protein	psRNATarget