ncRNA ID | novel_egu_miR164 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr3:4159294-4159412 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGAAAAUGUAGAGAGAAGGUAG - 24 |
Stem-loop(if miRNA) |
--        U U          --U            -                CUCUCAU   AGAGAAAA G AGAGAGAAGG   AGAGAGAGGAGG GAGGAAAGAGAGAGAA       U   |||||||| | ||||||||||   |||||||||||| ||||||||||||||||   UUUCUUUU C UUUUUCUUCC   UCUUUUUCUUUU CUUUUUUUUUUUUCUU       A UU        - -          UUU            U                UUUUUUU |
Stem-loop sequence | AGAGAAAAUGUAGAGAGAAGGUAGAGAGAGGAGGGAGGAAAGAGAGAGAACUCUCAUUAUUUUUUUUUCUUUUUUUUUUUUCUUUUUCUUUUUCUUUUCCUUCUUUUUCUUUUCUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01047799.1 |
|
2.0 | TSA: Elaeis guineensis Unigene29640_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010908148.1 |
|
2.5 | PREDICTED: Elaeis guineensis potassium transporter 26-like (LOC105033386), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010911311.1 |
|
2.5 | PREDICTED: Elaeis guineensis potassium transporter 26-like (LOC105035672), mRNA | NA | coding protein | psRNATarget |