ncRNA ID | novel_egu_miR163 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr3:25552466-25552644 [+] |
Reference genome | EG5 |
Source | SRR5189967 |
Length | 19 |
Mature sequence(if miRNA) | 161 - UUAAAUGAAAAAGUCGAUC - 179 |
Stem-loop(if miRNA) |
--              A          A            C C     C          --------------------                - AUA   UUGGCUUUUUCGUU GAAAAUUUUG AUGAUAAAAAUA C UUAUU UUUAGAAAAA                    AUUAUGAUAUCUUGCG C   U   |||||||||||||| |||||||||| |||||||||||| | ||||| ||||||||||                    |||||||||||||||| |   AGCUGAAAAAGUAA UUUUUAAAAC UACUGUUUUUAU G GAUAA AAAUUUUUUU                    UAAUACUGUAGGACGC G   U CU              A          A            A A     A          AAUACUAUAAAAUAUAAAUA                A GUA |
Stem-loop sequence | UUGGCUUUUUCGUUAGAAAAUUUUGAAUGAUAAAAAUACCCUUAUUCUUUAGAAAAAAUUAUGAUAUCUUGCGCAUAUUAUGGACGCAGGAUGUCAUAAUAUAAAUAUAAAAUAUCAUAAUUUUUUUAAAAAAUAGAGAUAUUUUUGUCAUACAAAAUUUUUAAAUGAAAAAGUCGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010941411.1 |
|
2.5 | PREDICTED: Elaeis guineensis protein DMR6-LIKE OXYGENASE 2 (LOC105058466), mRNA | NA | coding protein | psRNATarget |