Search result

BaseInfo

ncRNA ID novel_egu_miR160
Species Elaeis guineensis
Class miRNA
Genome position Chr3:10594793-10594989 [+]
Reference genome EG5
Source SRR5189967;SRR3042542;SRR3042544;SRR3042547
Length 24
Mature sequence(if miRNA) 174 - AAGCAGUUUUGAGAUAGUAGAUCA - 197
Stem-loop(if miRNA) --        C A                       A            A       UAG       --        A       --AU   UC   UUCAA
  AUCUACUA C UAAAACUGCUUGCAUAUAAAAAA UCAUAUGAUUUG AGAUCUU   GCUAUAU  AUUAAGUG UCAAAAA    ACA  CAA     U
  |||||||| | ||||||||||||||||||||||| |||||||||||| |||||||   |||||||  |||||||| |||||||    |||  |||
  UAGAUGAU G GUUUUGACGAACGUAUAUUUUUU AGUAUAUUAAAC UCUAGGG   UGGUAUA  UAGUUCAU AGUUUUU    UGU  GUU     U
AC        A A                       -            C       --A       CG        C       AACC   CA   UUAUU
Stem-loop sequence AUCUACUACCAUAAAACUGCUUGCAUAUAAAAAAAUCAUAUGAUUUGAAGAUCUUUAGGCUAUAUAUUAAGUGAUCAAAAAAUACAUCCAAUUCAAUUUUAUUUUGACUGUCCAAUUUUUGACUACUUGAUGCAUAUGGUAGGGAUCUCCAAAUUAUAUGAUUUUUUAUAUGCAAGCAGUUUUGAGAUAGUAGAUCA