ncRNA ID | novel_egu_miR160 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr3:10594793-10594989 [+] |
Reference genome | EG5 |
Source | SRR5189967;SRR3042542;SRR3042544;SRR3042547 |
Length | 24 |
Mature sequence(if miRNA) | 174 - AAGCAGUUUUGAGAUAGUAGAUCA - 197 |
Stem-loop(if miRNA) |
--        C A                       A            A       UAG       --        A       --AU   UC   UUCAA   AUCUACUA C UAAAACUGCUUGCAUAUAAAAAA UCAUAUGAUUUG AGAUCUU   GCUAUAU  AUUAAGUG UCAAAAA    ACA  CAA     U   |||||||| | ||||||||||||||||||||||| |||||||||||| |||||||   |||||||  |||||||| |||||||    |||  |||   UAGAUGAU G GUUUUGACGAACGUAUAUUUUUU AGUAUAUUAAAC UCUAGGG   UGGUAUA  UAGUUCAU AGUUUUU    UGU  GUU     U AC        A A                       -            C       --A       CG        C       AACC   CA   UUAUU |
Stem-loop sequence | AUCUACUACCAUAAAACUGCUUGCAUAUAAAAAAAUCAUAUGAUUUGAAGAUCUUUAGGCUAUAUAUUAAGUGAUCAAAAAAUACAUCCAAUUCAAUUUUAUUUUGACUGUCCAAUUUUUGACUACUUGAUGCAUAUGGUAGGGAUCUCCAAAUUAUAUGAUUUUUUAUAUGCAAGCAGUUUUGAGAUAGUAGAUCA |