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BaseInfo

ncRNA ID novel_egu_miR159
Species Elaeis guineensis
Class miRNA
Genome position Chr3:43366684-43366771 [-]
Reference genome EG5
Source SRR5189967;SRR3042542;SRR3042548
Length 24
Mature sequence(if miRNA) 65 - AGUAGAAAAUUUUGAGAGGGCGAG - 88
Stem-loop(if miRNA) ---AG  G        GA    G    CAGUUCCUUAAU      G     
     UA AAAAUUUU  GAGG CGAG            GUUGGA AUAGAA
     || ||||||||  |||| ||||            |||||| |||||G
     AU UUUUAAGA  UUCC GUUU            UAACCU UGUUUC
GUUCG  G        -G    G    ------------      -     
Stem-loop sequence AGUAGAAAAUUUUGAGAGGGCGAGCAGUUCCUUAAUGUUGGAGAUAGAAGCUUUGUUCCAAUUUUGGCCUUGAGAAUUUUGUAGCUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01039157.1
ncRNA:24   GAGCGGGAGAGUUUUAAAAGAUGA   1
  |||*|=|*|||||||||||||||*
targets:87   CUCCCUCCCUCAAAAUUUUCUACC   110

3.0 TSA: Elaeis guineensis Unigene20994_All transcribed RNA sequence NA coding protein psRNATarget