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BaseInfo

ncRNA ID novel_egu_miR147
Species Elaeis guineensis
Class miRNA
Genome position Chr2:25541485-25541602 [+]
Reference genome EG5
Source SRR5189964
Length 23
Mature sequence(if miRNA) 1 - GAUCACUGGAUGUGGAUGGACAU - 23
Stem-loop(if miRNA) --    ACU      ----        AUAUGAAGGC   CUGCAACCAGUAGAGUACUGAAGAGUA
  GAUC   GGAUGU    GGAUGGAC          CCU                           U
  ||||   ||||||    ||||||||          |||
  CUAG   CUUACG    CCUAUCUG          CUA                           U
AA    ---      AUGA        ---------A   AGAUGGCAUAGGAGACGGUGGAUAAUC
Stem-loop sequence GAUCACUGGAUGUGGAUGGACAUAUGAAGGCCCUCUGCAACCAGUAGAGUACUGAAGAGUAUUCUAAUAGGUGGCAGAGGAUACGGUAGAAUCAGUCUAUCCAGUAGCAUUCGAUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JO087299.1
ncRNA:23   UACAGGUAGGUGUAGGUCACUAG   1
  ****=*||||||||||||||||=
targets:530   CACAUAAUCCACAUCCAGUGAUU   552

3.0 TSA: Elaeis guineensis isotig00055.Elguifruit mRNA sequence NA coding protein psRNATarget