ncRNA ID | novel_egu_miR147 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr2:25541485-25541602 [+] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GAUCACUGGAUGUGGAUGGACAU - 23 |
Stem-loop(if miRNA) |
--    ACU      ----        AUAUGAAGGC   CUGCAACCAGUAGAGUACUGAAGAGUA   GAUC   GGAUGU    GGAUGGAC          CCU                           U   ||||   ||||||    ||||||||          |||   CUAG   CUUACG    CCUAUCUG          CUA                           U AA    ---      AUGA        ---------A   AGAUGGCAUAGGAGACGGUGGAUAAUC |
Stem-loop sequence | GAUCACUGGAUGUGGAUGGACAUAUGAAGGCCCUCUGCAACCAGUAGAGUACUGAAGAGUAUUCUAAUAGGUGGCAGAGGAUACGGUAGAAUCAGUCUAUCCAGUAGCAUUCGAUCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JO087299.1 |
|
3.0 | TSA: Elaeis guineensis isotig00055.Elguifruit mRNA sequence | NA | coding protein | psRNATarget |