ncRNA ID | novel_egu_miR144 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr2:9014354-9014573 [-] |
Reference genome | EG5 |
Source | SRR5189964;SRR3042542;SRR3042545;SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 197 - UUGAAUGACGAAAAUACUCCUACU - 220 |
Stem-loop(if miRNA) |
--                C    A       AA               A    --         GACAUCAUGUAGUAUAUUAUGACAUCAUGUGGCAUAUUAUGGCAUCA   UUGAAUGACGAAAAUA UCCU CUCUUUG  AAAAAUUAUGACAUU UCUA  GUAUAUUAU                                               A   |||||||||||||||| |||| |||||||  ||||||||||||||| ||||  |||||||||   AACUUGCUGCUUUUAU AGGA GAGAAAU  UUUUUAAUACUGUAG AUAC  GUAUAAUAC                                               A AA                A    C       CA               A    AG         UGUAGAACGUACGUCCUUCAGUAUUAAACUGCACGUCUUACAGUAUU |
Stem-loop sequence | UUGAAUGACGAAAAUACUCCUACUCUUUGAAAAAAAUUAUGACAUUAUCUAGUAUAUUAUGACAUCAUGUAGUAUAUUAUGACAUCAUGUGGCAUAUUAUGGCAUCAAAUUAUGACAUUCUGCACGUCAAAUUAUGACUUCCUGCAUGCAAGAUGUCAUAAUAUGGACAUAAGAUGUCAUAAUUUUUACUAAAGAGCAGGAAUAUUUUCGUCGUUCAAAA |