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BaseInfo

ncRNA ID novel_egu_miR139
Species Elaeis guineensis
Class miRNA
Genome position Chr2:20589847-20589901 [-]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 32 - AGGUAUGAUUGGCUCUCUACUAUA - 55
Stem-loop(if miRNA) ---A      A UG CUC       UAUU
    GGUAUG U  G   UCUACUA    U
    |||||| |  |   |||||||    A
    UCAUAU A  C   AGAUGAU    A
UUUC      - GU --C       UGUC
Stem-loop sequence AGGUAUGAUUGGCUCUCUACUAUAUUUAACUGUUAGUAGACCUGAUAUACUCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01031789.1
ncRNA:24   AUAUCAUCUCUCGGUUAGUAUGGA   1
  ||||*||**|||||||||||||||
targets:470   UAUAAUAAUGAGCCAAUCAUACCU   493

2.0 TSA: Elaeis guineensis Unigene13622_All transcribed RNA sequence NA coding protein psRNATarget