ncRNA ID | novel_egu_miR129 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr16:18192800-18192914 [-] |
Reference genome | EG5 |
Source | SRR5189964;SRR5189967 |
Length | 24 |
Mature sequence(if miRNA) | 92 - GAGAGAAAAUGUAGAGAGAAGGUA - 115 |
Stem-loop(if miRNA) |
--         UGU          U        G            A           A   GAGAGAAAA   AGAGAGAAGG AAAGAGAG AAAGAGAGAGAA GGAGAGAGAGG G   |||||||||   |||||||||| |||||||| |||||||||||| |||||||||||   UUUUCUUUU   UUUCUUUUUC UUUUUCUC UUUCUUUUUUUU CCUUUCUCUUU A UU         UUU          -        -            -           U |
Stem-loop sequence | GAGAGAAAAUGUAGAGAGAAGGUAAAGAGAGGAAAGAGAGAGAAAGGAGAGAGAGGAGAUUUUCUCUUUCCUUUUUUUUCUUUCUCUUUUUCUUUUUCUUUUUUUUUUCUUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01047799.1 |
|
2.0 | TSA: Elaeis guineensis Unigene29640_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010910260.2 |
|
3.0 | PREDICTED: Elaeis guineensis callose synthase 3-like (LOC105034926), mRNA | NA | coding protein | psRNATarget |