ncRNA ID | novel_egu_miR120 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr15:16041203-16041280 [-] |
Reference genome | EG5 |
Source | SRR5189964;SRR3042542;SRR3042544;SRR3042545;SRR3042547;SRR3042548 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UGAAGUGUUUGGGGGAACUC - 20 |
Stem-loop(if miRNA) |
--                  U    --CCGUUC     AA   GUUCCCUCAGACACUUCA UAGG        UCUUC  U   |||||||||||||||||| ||||        |||||   CAAGGGGGUUUGUGAAGU AUCC        AGAGG  A CU                  C    UAAAUACC     AU |
Stem-loop sequence | GUUCCCUCAGACACUUCAUUAGGCCGUUCUCUUCAAUAUAGGAGACCAUAAAUCCUACUGAAGUGUUUGGGGGAACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019848862.1 |
|
1.5 | PREDICTED: Elaeis guineensis ATP sulfurylase 1, chloroplastic-like (LOC105042220), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010927955.2 |
|
2.5 | PREDICTED: Elaeis guineensis low affinity sulfate transporter 3 (LOC105048606), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
GBSV01019820.1 |
|
2.5 | TSA: Elaeis guineensis Unigene1648_All transcribed RNA sequence | NA | coding protein | psRNATarget |