ncRNA ID | novel_egu_miR119 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr15:16056045-16056122 [-] |
Reference genome | EG5 |
Source | SRR5189964;SRR3042542;SRR3042544;SRR3042545;SRR3042547;SRR3042548 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UGAAGUGUUUGGGGGAACUC - 20 |
Stem-loop(if miRNA) |
--                  U    ----CC        CA   GUUCCCUCAGACACUUCA UAGG      GUUCUCUU  A   |||||||||||||||||| ||||      ||||||||   CAAGGGGGUUUGUGAAGU AUCC      CGAGGGGA  U CU                  C    CAAAUA        UA |
Stem-loop sequence | GUUCCCUCAGACACUUCAUUAGGCCGUUCUCUUCAAUAUAGGGGAGCAUAAACCCUACUGAAGUGUUUGGGGGAACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019848862.1 |
|
1.5 | PREDICTED: Elaeis guineensis ATP sulfurylase 1, chloroplastic-like (LOC105042220), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010927955.2 |
|
2.5 | PREDICTED: Elaeis guineensis low affinity sulfate transporter 3 (LOC105048606), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
GBSV01019820.1 |
|
2.5 | TSA: Elaeis guineensis Unigene1648_All transcribed RNA sequence | NA | coding protein | psRNATarget |