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BaseInfo

ncRNA ID novel_egu_miR115
Species Elaeis guineensis
Class miRNA
Genome position Chr15:14734480-14734585 [+]
Reference genome EG5
Source SRR5189964;SRR5189967;SRR3042542;SRR3042544;SRR3042547
Length 24
Mature sequence(if miRNA) 1 - UGACAUCCUGUGGCAUAUUAUGAU - 24
Stem-loop(if miRNA) --UGA    C                A  C  UG C A        UU   GC
     CAUC UGUGGCAUAUUAUGAU UC UG  U A AUUAUGAU  UCU  A
     |||| |||||||||||||||| || ||  | | ||||||||  |||  C
     GUAG AUAUUGUAUAAUAUUG AG AU  G U UAAUAUUG  AGA  A
AUAUG    A                A  U  GU C A        -U   AA
Stem-loop sequence UGACAUCCUGUGGCAUAUUAUGAUAUCCUGUGUCAAAUUAUGAUUUUCUGCACAAAAGAUGUUAUAAUAUCGUGUAUGAAGUUAUAAUAUGUUAUAAGAUGGUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019851713.1
ncRNA:24   UAGUAUUAUACGGUGUCCUACAGU   1
  =||*|||||||||||*|||||||*
targets:1696   GUCCUAAUAUGCCACUGGAUGUCU   1719

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105048955 (LOC105048955), mRNA NA coding protein psRNATarget