ncRNA ID | novel_egu_miR115 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr15:14734480-14734585 [+] |
Reference genome | EG5 |
Source | SRR5189964;SRR5189967;SRR3042542;SRR3042544;SRR3042547 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGACAUCCUGUGGCAUAUUAUGAU - 24 |
Stem-loop(if miRNA) |
--UGA    C                A  C  UG C A        UU   GC      CAUC UGUGGCAUAUUAUGAU UC UG  U A AUUAUGAU  UCU  A      |||| |||||||||||||||| || ||  | | ||||||||  |||  C      GUAG AUAUUGUAUAAUAUUG AG AU  G U UAAUAUUG  AGA  A AUAUG    A                A  U  GU C A        -U   AA |
Stem-loop sequence | UGACAUCCUGUGGCAUAUUAUGAUAUCCUGUGUCAAAUUAUGAUUUUCUGCACAAAAGAUGUUAUAAUAUCGUGUAUGAAGUUAUAAUAUGUUAUAAGAUGGUAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019851713.1 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC105048955 (LOC105048955), mRNA | NA | coding protein | psRNATarget |