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BaseInfo

ncRNA ID novel_egu_miR114
Species Elaeis guineensis
Class miRNA
Genome position Chr1:25774327-25774369 [+]
Reference genome EG5
Source SRR5189964
Length 21
Mature sequence(if miRNA) 1 - UGAACGUUGGAGAUGGAAGCC - 21
Stem-loop(if miRNA) --    C       A     GC
  UGAA GUUGGAG UGGAA  C
  |||| ||||||| |||||
  AUUU CGAUCUU AUCUU  U
GG    -       G     AC
Stem-loop sequence UGAACGUUGGAGAUGGAAGCCUCAUUCUAGUUCUAGCUUUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010941336.2
ncRNA:21   CCGAAGGUAGAGGUUGCAAGU   1
  **|||=||||||||=||||||
targets:96   UACUUUCAUCUCCAGCGUUCA   116

2.5 PREDICTED: Elaeis guineensis LIN1-like protein (LOC105058412), transcript variant X1, mRNA NA coding protein psRNATarget
XM_019855209.1
ncRNA:21   CCGAAGGUAGAGGUUGCAAGU   1
  **|||=||||||||=||||||
targets:95   UACUUUCAUCUCCAGCGUUCA   115

2.5 PREDICTED: Elaeis guineensis LIN1-like protein (LOC105058412), transcript variant X3, mRNA NA coding protein psRNATarget