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BaseInfo

ncRNA ID novel_egu_miR112
Species Elaeis guineensis
Class miRNA
Genome position Chr15:4910201-4910286 [-]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 63 - UGACAUCCUGUGGUAUAUUAUGAC - 86
Stem-loop(if miRNA) --   C      U   -                -CAU    UUA
  UGA AUCCUG GGU AUAUUAUGACAUUCUG    CAAA   U
  ||| |||||| ||| ||||||||||||||||    ||||   A
  ACU UAGGAC CCA UAUAAUACUGUAGGAC    GUUU   A
AU   A      -   G                ACAU    UUC
Stem-loop sequence UGACAUCCUGUGGUAUAUUAUGACAUUCUGCAUCAAAUUAUAACUUUUUGUACACAGGAUGUCAUAAUAUGACCCAGGAUAUCAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010937075.1
ncRNA:24   CAGUAUUAUAUGGUGUCC-UACAGU   1
  ||=**|||||||||||||-||||||
targets:1393   GUUCCAAUAUACCACAGGGAUGUCA   1417

3.0 PREDICTED: Elaeis guineensis wall-associated receptor kinase-like 20 (LOC105055290), mRNA NA coding protein psRNATarget