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BaseInfo

ncRNA ID	ath-miRf10860-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UCCUUAUGAGCAAUCUCCAAU - NA
Stem-loop(if miRNA)	U      A                   A    -     - CAAUACAU   GUUCCAUUUUGUCUAUGCAGGUUAAUCA GA AGUAAC UCCUUAUGAGCAAUCUCCA UUCC CUUUG G        UCU                            G || |||||| ||||||||||||||||||| |||| ||||| |        |||                            A CU UCAUUG AGGAAUACUCGUUAGAGGU AAGG GUCCG A        GCC                            C   U      C                   -    A     C --------   AUAUCUAGGUUCAUUGGGCCACUGAGAC
Stem-loop sequence	GAUAGUAACAUCCUUAUGAGCAAUCUCCAAUUCCCUUUGGCAAUACAUUCUGUUCCAUUUUGUCUAUGCAGGUUAAUCAGACCAGAGUCACCGGGUUACUUGGAUCUAUACCGACGCCUGAGGAAUGGAGAUUGCUCAUAAGGACGUUACUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_121952.3	ncRNA:21   UAACCUCUAACGAGUAUUCCU   1   |*||||||||||||||||||| targets:1167   AAUGGAGAUUGCUCAUAAGGA   1187 Target Full Sequence	0.0	Arabidopsis thaliana nudix hydrolase homolog 24 (NUDT24), mRNA	nudix hydrolase homolog 24(NUDT24)	coding protein	psRNATarget
NM_001343605.1	ncRNA:21   UAACCUCUAACGAGUAUUCCU   1   |*||||||||||||||||||| targets:1295   AAUGGAGAUUGCUCAUAAGGA   1315 Target Full Sequence	0.0	Arabidopsis thaliana nudix hydrolase homolog 24 (NUDT24), mRNA	nudix hydrolase homolog 24(NUDT24)	coding protein	psRNATarget
AY117160.1	ncRNA:21   UAACCUCUAACGAGUAUUCCU   1   |*|*|||||||||||||=||| targets:1108   AAUAGAGAUUGCUCAUAGGGA   1128 Target Full Sequence	2.5	Arabidopsis thaliana unknown protein (At5g19460) mRNA, complete cds	NA	coding protein	psRNATarget
BX829508.1	ncRNA:21   UAACCUCUAACGAGUAUUCCU   1   |*|*|||||||||||||=||| targets:1203   AAUAGAGAUUGCUCAUAGGGA   1223 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZE04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX830385.1	ncRNA:21   UAACCUCUAACGAGUAUUCCU   1   |*|*|||||||||||||=||| targets:1112   AAUAGAGAUUGCUCAUAGGGA   1132 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZC09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY074342.1	ncRNA:21   UAACCUCUAACGAGUAUUCCU   1   |*|*|||||||||||||=||| targets:1121   AAUAGAGAUUGCUCAUAGGGA   1141 Target Full Sequence	2.5	Arabidopsis thaliana unknown protein (At5g19460) mRNA, complete cds	NA	coding protein	psRNATarget
NM_121951.5	ncRNA:21   UAACCUCUAACGAGUAUUCCU   1   |*|*|||||||||||||=||| targets:1471   AAUAGAGAUUGCUCAUAGGGA   1491 Target Full Sequence	2.5	Arabidopsis thaliana nudix hydrolase homolog 20 (NUDT20), mRNA	nudix hydrolase homolog 20(NUDT20)	coding protein	psRNATarget
NM_180400.1	ncRNA:21   UAACCUCUAACGAGUAUUCCU   1   *|||||*||||||||||||*| targets:819   UUUGGAUAUUGCUCAUAAGAA   839 Target Full Sequence	2.5	Arabidopsis thaliana cytochrome P450, family 76, subfamily C, polypeptide 7 (CYP76C7), partial mRNA	cytochrome P450, family 76, subfamily C, polypeptide 7(CYP76C7)	coding protein	psRNATarget
NM_115968.2	ncRNA:21   UAACCUCUAACGAGUAUUCCU   1   *|||||*||||||||||||*| targets:819   UUUGGAUAUUGCUCAUAAGAA   839 Target Full Sequence	2.5	Arabidopsis thaliana cytochrome P450, family 76, subfamily C, polypeptide 7 (CYP76C7), partial mRNA	cytochrome P450, family 76, subfamily C, polypeptide 7(CYP76C7)	coding protein	psRNATarget