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BaseInfo

ncRNA ID novel_egu_miR109
Species Elaeis guineensis
Class miRNA
Genome position Chr15:7445075-7445124 [-]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 27 - GUGGAUGGAUGAAGAUAACAAGGC - 50
Stem-loop(if miRNA) --       GA     -      AGG
  GUGGAUG  UGAAG AUAACA   C
  |||||||  ||||| ||||||
  UAUCUAC  AUUUU UAUUGU   A
UG       -G     A      GAA
Stem-loop sequence GUGGAUGGAUGAAGAUAACAAGGCAAAGUGUUAUAUUUUAGCAUCUAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010912943.1
ncRNA:24   CGGAACAAUAGAAGUAGGUAGGUG   1
  *==||*||=||||||||||||||=
targets:950   CUUUUUUUGUCUUCAUCCAUCCAU   973

3.0 PREDICTED: Elaeis guineensis glucomannan 4-beta-mannosyltransferase 1 (LOC105037255), mRNA NA coding protein psRNATarget