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BaseInfo

ncRNA ID novel_egu_miR108
Species Elaeis guineensis
Class miRNA
Genome position Chr1:23868271-23868361 [+]
Reference genome EG5
Source SRR5189964
Length 20
Mature sequence(if miRNA) 1 - AGAUUACGACAGUGGUUGUG - 20
Stem-loop(if miRNA) --    U   A           -       - C        AAAAAU
  AGAU ACG CAGUGGUUGUG AACCAUU C GUAGGCUA      U
  |||| ||| ||||||||||| ||||||| | ||||||||
  UCUA UGU GUCACCAACAC UUGGUAA G CAUCUGAU      A
UG    -   C           G       U A        AUCGUC
Stem-loop sequence AGAUUACGACAGUGGUUGUGAACCAUUCCGUAGGCUAAAAAAUUACUGCUAUAGUCUACAGUAAUGGUUGCACAACCACUGCUGUAUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01026458.1
ncRNA:20   GUGUUGGUGACAGCAUUAGA   1
  |*||||=||||||||||||*
targets:176   CCCAACUACUGUCGUAAUCC   195

3.0 TSA: Elaeis guineensis Unigene8288_All transcribed RNA sequence NA coding protein psRNATarget