ncRNA ID | novel_egu_miR106 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:4733270-4733358 [+] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGGACAGACUCAACAAACUGAA - 24 |
Stem-loop(if miRNA) |
--A       -  C   A            A   -----    UUCUC    GAGGACA GA UCA CAAACUGAAGAA GAU     GGUC     G    ||||||| || ||| |||||||||||| |||     ||||     A    CUUCUGU CU AGU GUUUGACUUUUU CUA     UCAG     A GAA       A  A   -            -   AACUU    UUACC |
Stem-loop sequence | AGAGGACAGACUCAACAAACUGAAGAAAGAUGGUCUUCUCGAACCAUUGACUUUCAAAUCUUUUUCAGUUUGUGAAUCAUGUCUUCAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010911488.1 |
|
2.5 | PREDICTED: Elaeis guineensis ankyrin repeat domain-containing protein 2A (LOC105035787), mRNA | NA | coding protein | psRNATarget |