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BaseInfo

ncRNA ID novel_egu_miR106
Species Elaeis guineensis
Class miRNA
Genome position Chr11:4733270-4733358 [+]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 1 - AGAGGACAGACUCAACAAACUGAA - 24
Stem-loop(if miRNA) --A       -  C   A            A   -----    UUCUC
   GAGGACA GA UCA CAAACUGAAGAA GAU     GGUC     G
   ||||||| || ||| |||||||||||| |||     ||||     A
   CUUCUGU CU AGU GUUUGACUUUUU CUA     UCAG     A
GAA       A  A   -            -   AACUU    UUACC
Stem-loop sequence AGAGGACAGACUCAACAAACUGAAGAAAGAUGGUCUUCUCGAACCAUUGACUUUCAAAUCUUUUUCAGUUUGUGAAUCAUGUCUUCAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010911488.1
ncRNA:24   AAGUCAAACAACUCAGACAGGAGA   1
  ||=||*|||||||||||||=||||
targets:1322   UUUAGGUUGUUGAGUCUGUUCUCU   1345

2.5 PREDICTED: Elaeis guineensis ankyrin repeat domain-containing protein 2A (LOC105035787), mRNA NA coding protein psRNATarget