ncRNA ID | novel_egu_miR102 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:4732062-4732134 [+] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 24 |
Mature sequence(if miRNA) | 50 - GUGGAUGGAUGAAGAUAACAAGGC - 73 |
Stem-loop(if miRNA) |
-  A       CGC         -    GA    CGAG  CU UGUUAUC   UCGUCCAUC ACUU  UCAA    C  || |||||||   ||||||||| ||||  ||||  GG ACAAUAG   AGUAGGUAG UGAA  AGUU    U C  A       --A         G    -G    CACA |
Stem-loop sequence | CUAUGUUAUCCGCUCGUCCAUCACUUGAUCAACGAGCUACACUUGAGAAGUGGAUGGAUGAAGAUAACAAGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010912943.1 |
|
3.0 | PREDICTED: Elaeis guineensis glucomannan 4-beta-mannosyltransferase 1 (LOC105037255), mRNA | NA | coding protein | psRNATarget |