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BaseInfo

ncRNA ID novel_egu_miR102
Species Elaeis guineensis
Class miRNA
Genome position Chr11:4732062-4732134 [+]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 50 - GUGGAUGGAUGAAGAUAACAAGGC - 73
Stem-loop(if miRNA) -  A       CGC         -    GA    CGAG
 CU UGUUAUC   UCGUCCAUC ACUU  UCAA    C
 || |||||||   ||||||||| ||||  ||||
 GG ACAAUAG   AGUAGGUAG UGAA  AGUU    U
C  A       --A         G    -G    CACA
Stem-loop sequence CUAUGUUAUCCGCUCGUCCAUCACUUGAUCAACGAGCUACACUUGAGAAGUGGAUGGAUGAAGAUAACAAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010912943.1
ncRNA:24   CGGAACAAUAGAAGUAGGUAGGUG   1
  *==||*||=||||||||||||||=
targets:950   CUUUUUUUGUCUUCAUCCAUCCAU   973

3.0 PREDICTED: Elaeis guineensis glucomannan 4-beta-mannosyltransferase 1 (LOC105037255), mRNA NA coding protein psRNATarget