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BaseInfo

ncRNA ID	novel_egu_miR89
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:1455371-1455481 [-]
Reference genome	EG5
Source	SRR5189964
Length	24
Mature sequence(if miRNA)	88 - AGAGGAGAUUAGGCAACAGUGGAA - 111
Stem-loop(if miRNA)	--         U          --G  -   AACCAGG   UC     GAGA      A   AGAGGAGAU AGGCAACAGU   GA AAG       GGC  AGCUU    AAGCUU A   ||||||||| ||||||||||   || |||       |||  |||||    ||||||   UUUCCUCUA UCCGUUGUUA   CU UUC       CUG  UCGAA    UUUGAG G AU         U          AAA  A   ---AAAA   -U     AGAG      A
Stem-loop sequence	AGAGGAGAUUAGGCAACAGUGGAAAGAACCAGGGGCUCAGCUUGAGAAAGCUUAAGAGAGUUUGAGAAAGCUUGUCAAAACUUAUCAAAAUUGUUGCCUUAUCUCCUUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010910579.2	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   ||=||||||||||||=|||||||| targets:2570   UUUCACUGUUGCCUAGUCUCCUCU   2593 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis ruvB-like protein 1 (LOC105035142), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010910578.2	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   ||=||||||||||||=|||||||| targets:1803   UUUCACUGUUGCCUAGUCUCCUCU   1826 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis ruvB-like protein 1 (LOC105035142), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01017180.1	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   |||=|||||||||||=|||||||| targets:202   UUCUACUGUUGCCUAGUCUCCUCU   225 Target Full Sequence	1.5	TSA: Elaeis guineensis CL6496.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01042041.1	ncRNA:24   AAG-GUGACAACGGAUUAGAGGAGA   1   |||-||||||||||||=|||||||| targets:87   UUCUCACUGUUGCCUAGUCUCCUCU   111 Target Full Sequence	1.5	TSA: Elaeis guineensis Unigene23881_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_019854302.1	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   **|=|=|*||*||||||||||||| targets:132   CCCUAUUUUUCCCUAAUCUCCUCU   155 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis uncharacterized LOC105055445 (LOC105055445), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010938358.2	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   **|=|=|*||*||||||||||||| targets:132   CCCUAUUUUUCCCUAAUCUCCUCU   155 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis uncharacterized LOC105055445 (LOC105055445), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010939876.2	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   **|=|=|*||*||||||||||||| targets:132   CCCUAUUUUUCCCUAAUCUCCUCU   155 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis uncharacterized LOC105055445 (LOC105055445), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_010937630.2	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   **|=|=|*||*||||||||||||| targets:132   CCCUAUUUUUCCCUAAUCUCCUCU   155 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis uncharacterized LOC105055445 (LOC105055445), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010939100.2	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   **|=|=|*||*||||||||||||| targets:132   CCCUAUUUUUCCCUAAUCUCCUCU   155 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis uncharacterized LOC105055445 (LOC105055445), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019854308.1	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   **|=|=|*||*||||||||||||| targets:132   CCCUAUUUUUCCCUAAUCUCCUCU   155 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis uncharacterized LOC105055445 (LOC105055445), transcript variant X6, mRNA	NA	coding protein	psRNATarget
GBSV01007543.1	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   **|=|=|*||*||||||||||||| targets:138   CCCUAUUUUUCCCUAAUCUCCUCU   161 Target Full Sequence	3.0	TSA: Elaeis guineensis CL2587.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01007545.1	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   **|=|=|*||*||||||||||||| targets:138   CCCUAUUUUUCCCUAAUCUCCUCU   161 Target Full Sequence	3.0	TSA: Elaeis guineensis CL2587.Contig3_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01007544.1	ncRNA:24   AAGGUGACAACGGAUUAGAGGAGA   1   **|=|=|*||*||||||||||||| targets:138   CCCUAUUUUUCCCUAAUCUCCUCU   161 Target Full Sequence	3.0	TSA: Elaeis guineensis CL2587.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget