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BaseInfo

ncRNA ID	novel_egu_miR85
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:5326937-5326980 [-]
Reference genome	EG5
Source	SRR5189964;SRR3042542;SRR3042544;SRR3042545
Length	21
Mature sequence(if miRNA)	1 - UGGUGUACAAAGAAUUUCUCA - 21
Stem-loop(if miRNA)	- U -U         C     G  G G  AUUUUUUGU CAUCG G  | |  ||||||||| |||||  C C  UAAGAAACA GUGGU G A U UU         U     G
Stem-loop sequence	GUGUAUUUUUUGUCCAUCGGGGGUGGUGUACAAAGAAUUUCUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01009931.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   **||||||||||||||||||= targets:85   CAAGAAAUUCUUUGUACACCG   105 Target Full Sequence	1.0	TSA: Elaeis guineensis CL3494.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01009933.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   **||||||||||||||||||= targets:61   CAAGAAAUUCUUUGUACACCG   81 Target Full Sequence	1.0	TSA: Elaeis guineensis CL3494.Contig3_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01018887.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   *||||||||||||||=||||| targets:429   GGAGAAAUUCUUUGUGCACCA   449 Target Full Sequence	1.5	TSA: Elaeis guineensis Unigene715_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_019847733.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   *||||||||||||||=||||| targets:1754   GGAGAAAUUCUUUGUGCACCA   1774 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis uncharacterized LOC109505281 (LOC109505281), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019847732.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   *||||||||||||||=||||| targets:2167   GGAGAAAUUCUUUGUGCACCA   2187 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis uncharacterized LOC109505281 (LOC109505281), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01035437.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   **|||||||||||||||||*| targets:92   CAAGAAAUUCUUUGUACACAA   112 Target Full Sequence	1.5	TSA: Elaeis guineensis Unigene17272_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_019849792.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   *||||||||=||||||||||= targets:1165   AGAGAAAUUUUUUGUACACCG   1185 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis Werner Syndrome-like exonuclease (LOC105043148), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019849791.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   *||||||||=||||||||||= targets:1325   AGAGAAAUUUUUUGUACACCG   1345 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis Werner Syndrome-like exonuclease (LOC105043148), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010920567.2	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   *||||||||=||||||||||= targets:1345   AGAGAAAUUUUUUGUACACCG   1365 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis Werner Syndrome-like exonuclease (LOC105043148), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010940755.2	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   *||||||||||||||||||== targets:2463   AGAGAAAUUCUUUGUACACUG   2483 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105058003 (LOC105058003), mRNA	NA	coding protein	psRNATarget
GBSV01025682.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   **|||||||||||||=||||= targets:319   CCAGAAAUUCUUUGUGCACCG   339 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene7511_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010939673.2	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   **|||||||||||||||=||= targets:1140   ACAGAAAUUCUUUGUACGCCG   1160 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis cationic peroxidase 1-like (LOC105057181), mRNA	NA	coding protein	psRNATarget
GBSV01033328.1	ncRNA:21   ACUCUUUAAGAAACAUGUGGU   1   |*|*|||||||||||*||||| targets:2494   UCAUAAAUUCUUUGUCCACCA   2514 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene15161_All transcribed RNA sequence	NA	coding protein	psRNATarget