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BaseInfo

ncRNA ID novel_egu_miR66
Species Elaeis guineensis
Class miRNA
Genome position Chr12:19368158-19368233 [+]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 1 - AGAAAUUAACGGAUGAUGACACAU - 24
Stem-loop(if miRNA) --          G AUGA        A U      AGU
  AGAAAUUAAC G    UGACACAU C CUCAAA   U
  |||||||||| |    |||||||| | ||||||   A
  UCUUUAAUUG U    ACUGUGUA G GAGUUU   A
AA          G AUUG        C -      AAA
Stem-loop sequence AGAAAUUAACGGAUGAUGACACAUACUCUCAAAAGUUAAAAAUUUGAGGCAUGUGUCAGUUAUGGUUAAUUUCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01031064.1
ncRNA:24   UACACAGUAGUAGGCAAUUAAAGA   1
  ***|*||||*|||||||=||||||
targets:1349   CAAUCUCAUGAUCCGUUGAUUUCU   1372

2.5 TSA: Elaeis guineensis Unigene12897_All transcribed RNA sequence NA coding protein psRNATarget