Search result

BaseInfo

ncRNA ID novel_egu_miR60
Species Elaeis guineensis
Class miRNA
Genome position Chr1:38540262-38540349 [-]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 65 - UGACAUCCUGUGGUAUAUUAUGAC - 88
Stem-loop(if miRNA) --       CU   -G          CA  C     AAA   UAU
  UGACAUC  GUG  UAUAUUAUGA  UU UGCAU   AAU   G
  |||||||  |||  ||||||||||  || |||||   |||
  ACUGUGG  UAC  AUAUAGUACU  AA ACGUA   UUA   A
AU       AG   AG          AA  A     -CA   UUC
Stem-loop sequence UGACAUCCUGUGGUAUAUUAUGACAUUCUGCAUAAAAAUUAUGACUUAUUACAUGCAAAAAAUCAUGAUAUAGACAUGAGGUGUCAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010937075.1
ncRNA:24   CAGUAUUAUAUGGUGUCC-UACAGU   1
  ||=**|||||||||||||-||||||
targets:1393   GUUCCAAUAUACCACAGGGAUGUCA   1417

3.0 PREDICTED: Elaeis guineensis wall-associated receptor kinase-like 20 (LOC105055290), mRNA NA coding protein psRNATarget