ncRNA ID | novel_egu_miR58 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr12:12299370-12299422 [+] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCGGUGGCUGCUUCUGGACGGCAU - 24 |
Stem-loop(if miRNA) |
--       C   UU    A    AUA   UCGGUGG UGC  CUGG CGGC   G   ||||||| |||  |||| ||||   G   GGUCGCC ACG  GGCC GCCG   G GC       -   UU    -    CGU |
Stem-loop sequence | UCGGUGGCUGCUUCUGGACGGCAUAGGGUGCGCCGCCGGUUGCACCGCUGGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01007683.1 |
|
2.5 | TSA: Elaeis guineensis CL2640.Contig2_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010916871.2 |
|
2.5 | PREDICTED: Elaeis guineensis 17.3 kDa class II heat shock protein-like (LOC105040381), mRNA | NA | coding protein | psRNATarget |