Search result

BaseInfo

ncRNA ID novel_egu_miR56
Species Elaeis guineensis
Class miRNA
Genome position Chr1:41407880-41407931 [-]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 1 - UGGCGACAUAAAUCCUCAGGACAA - 24
Stem-loop(if miRNA) --C  U    C    --      UG U
   UC CUGG GAUU  UGUCGU  G C
   || |||| ||||  ||||||  | U
   AG GACU CUAA  ACAGCG  C C
AAC  -    C    AU      GU U
Stem-loop sequence CUCUCUGGCGAUUUGUCGUUGGUCUCUCUGGCGACAUAAAUCCUCAGGACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01010926.1
ncRNA:24   AACAGGACUCCUAAAUACAGCGGU   1
  |||||||||**|||||||||||||
targets:66   UUGUCCUGAAAAUUUAUGUCGCCA   89

2.0 TSA: Elaeis guineensis CL3890.Contig1_All transcribed RNA sequence NA coding protein psRNATarget