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BaseInfo

ncRNA ID novel_egu_miR54
Species Elaeis guineensis
Class miRNA
Genome position Chr12:10056283-10056367 [+]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 1 - GUGGACUUCGGAUGGCAUUGGGGA - 24
Stem-loop(if miRNA) ---GU        G     AU    GAGG   G    AC     AG
     GGACUUCG AUGGC  UGGG    UUC ACAG  AUCGA  G
     |||||||| |||||  ||||    ||| ||||  |||||
     CCUGAGGC UGUCG  ACUU    AAG UGUU  UAGCU  U
GCCUG        -     --    ---A   A    GC     AG
Stem-loop sequence GUGGACUUCGGAUGGCAUUGGGGAGGUUCGACAGACAUCGAAGGUGAUCGAUCGUUGUAGAAAUUCAGCUGUCGGAGUCCGUCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01039130.1
ncRNA:24   AGGGGUUACGGUAGGCUUCAGGUG   1
  |||||||*||||||||||||||||
targets:181   UCCCCAACGCCAUCCGAAGUCCAC   204

1.0 TSA: Elaeis guineensis Unigene20967_All transcribed RNA sequence NA coding protein psRNATarget