ncRNA ID | novel_egu_miR53 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:48100229-48100297 [-] |
Reference genome | EG5 |
Source | SRR5189964;SRR5189967 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUAUCAGAUCGAGUACACAGCAU - 24 |
Stem-loop(if miRNA) |
--  C  --G       -       -----    U   A   GC UG   AUUCGAU UGAUAUU     UGCU GUG G   || ||   ||||||| |||||||     |||| ||| A   CG AC   UGAGCUA ACUAUAA     AUGA CAC C UA  -  ACA       G       UAGGA    -   U |
Stem-loop sequence | GCCUGGAUUCGAUUGAUAUUUGCUUGUGAGACUCACAGUAAGGAUAAUAUCAGAUCGAGUACACAGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JO092601.1 |
|
2.5 | TSA: Elaeis guineensis isotig05347.Elguifruit mRNA sequence | NA | coding protein | psRNATarget |