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BaseInfo

ncRNA ID novel_egu_miR51
Species Elaeis guineensis
Class miRNA
Genome position Chr10:16243191-16243254 [+]
Reference genome EG5
Source SRR5189964
Length 23
Mature sequence(if miRNA) 42 - GAUCGAAUUUGGAUAGGAUGCAU - 64
Stem-loop(if miRNA) -- G             C A         UAU
  G AUUUUAUCCAAAU C AUCAAAUUU   U
  | ||||||||||||| | |||||||||
  C UAGGAUAGGUUUA G UAGUUUAAA   U
UA G             A C         CUU
Stem-loop sequence GGAUUUUAUCCAAAUCCAAUCAAAUUUUAUUUUUCAAAUUUGAUCGAAUUUGGAUAGGAUGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019854338.1
ncRNA:23   UACGUAGGAUAGGUUUAAGCUAG   1
  =*|=*|=*|||||||||||||||
targets:379   GAGUUUUGUAUCCAAAUUCGAUC   401

3.0 PREDICTED: Elaeis guineensis protein ELF4-LIKE 3 (LOC105056448), transcript variant X1, mRNA NA coding protein psRNATarget
XM_019854340.1
ncRNA:23   UACGUAGGAUAGGUUUAAGCUAG   1
  =*|=*|=*|||||||||||||||
targets:379   GAGUUUUGUAUCCAAAUUCGAUC   401

3.0 PREDICTED: Elaeis guineensis protein ELF4-LIKE 3 (LOC105056448), transcript variant X3, mRNA NA coding protein psRNATarget