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BaseInfo

ncRNA ID novel_egu_miR47
Species Elaeis guineensis
Class miRNA
Genome position Chr12:6053199-6053262 [+]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 41 - UCAUAAUUUGACGUAGGAUGUCAU - 64
Stem-loop(if miRNA) --         G    U        AUC   U
  GACAUCCUG GUCA AUUAUGAC   CUA A
  ||||||||| |||| ||||||||   |||
  CUGUAGGAU CAGU UAAUACUG   GAU U
UA         G    U        AAA   G
Stem-loop sequence GACAUCCUGGGUCAUAUUAUGACAUCCUAUAUGUAGAAAGUCAUAAUUUGACGUAGGAUGUCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010912338.1
ncRNA:24   UACUGUAGGAUGCAGUUUAAUACU   1
  *|||*||||*||||*|||||||||
targets:341   UUGAGAUCCCACGUGAAAUUAUGA   364

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105036583 (LOC105036583), partial mRNA NA coding protein psRNATarget