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BaseInfo

ncRNA ID novel_egu_miR45
Species Elaeis guineensis
Class miRNA
Genome position Chr1:8736937-8737009 [+]
Reference genome EG5
Source SRR5189964
Length 20
Mature sequence(if miRNA) 54 - ACAAGGUUGCUGACACCUUC - 73
Stem-loop(if miRNA) ---A     GA   --     GACCA    AAG  GGC    A
    GUGUC  AGC  CCUUG     AGGG   CU   UCCC A
    |||||  |||  |||||     ||||   ||   ||||
    CACAG  UCG  GGAAC     UCCC   GG   AGGG C
CUUC     --   UU     ----A    --A  --A    U
Stem-loop sequence AGUGUCGAAGCCCUUGGACCAAGGGAAGCUGGCUCCCAACUGGGAAGGACCCUACAAGGUUGCUGACACCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01022997.1
ncRNA:20   CUUCCACAGUCGUUGGAACA   1
  |||||||||||||*|||||*
targets:160   GAAGGUGUCAGCAUCCUUGA   179

2.5 TSA: Elaeis guineensis Unigene4826_All transcribed RNA sequence NA coding protein psRNATarget