ncRNA ID | novel_egu_miR35 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr10:8866360-8866443 [-] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AUCUGAUCAGGAUUCGAGUU - 20 |
Stem-loop(if miRNA) |
--UC      -G    G     GG          GA     UG     UGAAUU  GAUC AGAUU  GAUCUGGGUC  GAUCU  A     ||||||  |||| |||||  ||||||||||  |||||     GCUUAG  CUAG UCUAG  CUAGACCUAG  UUAGG  U UUGA      GA    -     AG          AG     CU |
Stem-loop sequence | UCUGAAUUGGAUCGAGAUUGGGAUCUGGGUCGAGAUCUUGAUUCGGAUUGAGAUCCAGAUCGAGAUCUGAUCAGGAUUCGAGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010945551.2 |
|
2.5 | PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At5g65560-like (LOC105061489), mRNA | NA | coding protein | psRNATarget | |||||||||
GBSV01036436.1 |
|
3.0 | TSA: Elaeis guineensis Unigene18271_All transcribed RNA sequence | NA | coding protein | psRNATarget |