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BaseInfo

ncRNA ID	novel_egu_miR25
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr10:23021935-23022003 [+]
Reference genome	EG5
Source	SRR3042542;SRR5189964;SRR5189967;SRR3042544;SRR3042545;SRR3042547;SRR3042548
Length	21
Mature sequence(if miRNA)	1 - UGGAGAAGCAGGGCACGUGUU - 21
Stem-loop(if miRNA)	--      A C  G        -    -GA        UGGAGA G AG GCACGUGU UUGC   CAUCGG   |||||| | || |||||||| ||||   |||||A   ACCUCU C UC CGUGCACA GACG   GUAGCC UG      C A  G        C    ACC
Stem-loop sequence	UGGAGAAGCAGGGCACGUGUUUGCGACAUCGGACCGAUGCCAGCAGCACACGUGCGCUACCUCUCCAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010927670.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=|*||||||||||||||||| targets:1500   AGCCCGUGCCCUGCUUCUCCA   1520 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis protein CUP-SHAPED COTYLEDON 2-like (LOC105048369), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019851596.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=|*||||||||||||||||| targets:1208   AGCCCGUGCCCUGCUUCUCCA   1228 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis protein CUP-SHAPED COTYLEDON 2-like (LOC105048369), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019851595.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=|*||||||||||||||||| targets:1202   AGCCCGUGCCCUGCUUCUCCA   1222 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis protein CUP-SHAPED COTYLEDON 2-like (LOC105048369), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019850188.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=||*|||||||||||||||| targets:725   AGCAGGUGCCCUGCUUCUCCA   745 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis NAC domain-containing protein 21/22-like (LOC105033559), mRNA	NA	coding protein	psRNATarget
XM_010917701.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=|*||||||||||||||||| targets:1063   AGCCCGUGCCCUGCUUCUCCA   1083 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis protein CUP-SHAPED COTYLEDON 2 (LOC105040939), mRNA	NA	coding protein	psRNATarget
XM_010906348.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=||*|||||||||||||||| targets:643   AGCAGGUGCCCUGCUUCUCCA   663 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis NAC domain-containing protein 21/22 (LOC105032026), mRNA	NA	coding protein	psRNATarget
GBSV01017677.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=||*|||||||||||||||| targets:53   AGCAGGUGCCCUGCUUCUCCA   73 Target Full Sequence	1.0	TSA: Elaeis guineensis CL6729.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01017678.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=||*|||||||||||||||| targets:40   AGCAGGUGCCCUGCUUCUCCA   60 Target Full Sequence	1.0	TSA: Elaeis guineensis CL6729.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010941523.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:866   CCCACGUGACCUGCUUCUCCA   886 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 100 (LOC105058561), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010938895.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:820   CUCACGUGACCUGCUUCUCCA   840 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 100 (LOC105056634), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010941524.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:735   CCCACGUGACCUGCUUCUCCA   755 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 100 (LOC105058561), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010938896.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:794   CUCACGUGACCUGCUUCUCCA   814 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 100 (LOC105056634), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010938898.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:769   CUCACGUGACCUGCUUCUCCA   789 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 100 (LOC105056634), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010938897.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:754   CUCACGUGACCUGCUUCUCCA   774 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 100 (LOC105056634), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010938900.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:732   CUCACGUGACCUGCUUCUCCA   752 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 100 (LOC105056634), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_010938899.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:725   CUCACGUGACCUGCUUCUCCA   745 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 100 (LOC105056634), transcript variant X5, mRNA	NA	coding protein	psRNATarget
GBSV01017341.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:805   CUCACGUGACCUGCUUCUCCA   825 Target Full Sequence	1.5	TSA: Elaeis guineensis CL6571.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01017340.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:766   CUCACGUGACCUGCUUCUCCA   786 Target Full Sequence	1.5	TSA: Elaeis guineensis CL6571.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01017342.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:240   CCCACGUGACCUGCUUCUCCA   260 Target Full Sequence	1.5	TSA: Elaeis guineensis CL6571.Contig3_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010943266.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=||*||*||||||||||||| targets:701   AGCAGGUUCCCUGCUUCUCCA   721 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis NAC domain-containing protein 21/22-like (LOC105059815), mRNA	NA	coding protein	psRNATarget
GBSV01014904.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=||*||*||||||||||||| targets:284   AGCAGGUUCCCUGCUUCUCCA   304 Target Full Sequence	2.0	TSA: Elaeis guineensis CL5496.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010928608.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=||*|||=|||||||||||| targets:744   AGCAAGUGUCCUGCUUCUCCA   764 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 21/22-like (LOC105049070), mRNA	NA	coding protein	psRNATarget
GBSV01014905.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   |=||*|||=|||||||||||| targets:44   AGCAAGUGUCCUGCUUCUCCA   64 Target Full Sequence	2.5	TSA: Elaeis guineensis CL5496.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010918777.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||= targets:974   CCCACGUGACCUGCUUCUCCG   994 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 79 (LOC105041759), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010918778.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||= targets:726   CCCACGUGACCUGCUUCUCCG   746 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 79 (LOC105041759), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010918780.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||= targets:722   CCCACGUGACCUGCUUCUCCG   742 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 79 (LOC105041759), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010918781.1	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||= targets:715   CCCACGUGACCUGCUUCUCCG   735 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis NAC domain-containing protein 79 (LOC105041759), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010922343.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **==|*||||||||||||||| targets:529   CUUGCCUGCCCUGCUUCUCCA   549 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis UDP-glucuronic acid decarboxylase 6 (LOC105044444), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010922344.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **==|*||||||||||||||| targets:551   CUUGCCUGCCCUGCUUCUCCA   571 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis UDP-glucuronic acid decarboxylase 6 (LOC105044444), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010922347.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **==|*||||||||||||||| targets:443   CUUGCCUGCCCUGCUUCUCCA   463 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis UDP-glucuronic acid decarboxylase 6 (LOC105044444), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_010922345.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **==|*||||||||||||||| targets:423   CUUGCCUGCCCUGCUUCUCCA   443 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis UDP-glucuronic acid decarboxylase 6 (LOC105044444), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010922346.2	ncRNA:21   UUGUGCACGGGACGAAGAGGU   1   **==|*||||||||||||||| targets:357   CUUGCCUGCCCUGCUUCUCCA   377 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis UDP-glucuronic acid decarboxylase 6 (LOC105044444), transcript variant X4, mRNA	NA	coding protein	psRNATarget