ncRNA ID | novel_egu_miR4 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr7:26034937-26035039 [+] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 20 |
Mature sequence(if miRNA) | 84 - GUCUGGGAAAGAAUGCGGAU - 103 |
Stem-loop(if miRNA) |
--G   -    G G UG         -    UUU    U GA   -G   GAA    UGC UUCU U U  GACGGUUUC UCUA   ACUG G  UAA  AGU   A    ||| |||| | |  ||||||||| ||||   |||| |  |||  |||    GCG AAGA A G  CUGUUAGAG AGAU   UGAC C  GUU  UCA   G UAG   U    A G GU         G    UAC    U AC   AA   GCU |
Stem-loop sequence | GUGCUUCUGUGUUGGACGGUUUCUCUAUUUACUGUGGAUAAGAGUGAAAGUCGACUAAUUGCACUCAGUCAUUAGAGGAGAUUGUCUGGGAAAGAAUGCGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019853406.1 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC109506364 (LOC109506364), mRNA | NA | coding protein | psRNATarget | |||||||||
GBSV01034194.1 |
|
2.5 | TSA: Elaeis guineensis Unigene16027_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010926466.2 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC105047520 (LOC105047520), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010942784.2 |
|
3.0 | PREDICTED: Elaeis guineensis cytochrome P450 89A2 (LOC105059484), mRNA | NA | coding protein | psRNATarget |