| ncRNA ID | novel_csa_miR145 |
| Species | Camelina sativa |
| Class | miRNA |
| Genome position | Chr8:14874121-14874322 [+] |
| Reference genome | Cs |
| Source | SRR1736515 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAAAGAGGAUAAAAAUGAAAAUGU - 24 |
| Stem-loop(if miRNA) |
-- A -G A GA CU A A ---AACU CA AAAAGAGG UAAAAAUGAAAAUGUUCAAAAAAAAG GGUA UUUUGAAAAGG UAU CAAAAA GGUAUUUAUGA AAAUUCUC UUUUU U |||||||| |||||||||||||||||||||||||| |||| ||||||||||| ||| |||||| ||||||||||| |||||||| ||||| UUUUCUCC AUUUUUACUUUUACAAGUUUUUUUUU CCAU AAAACUUUUCC AUA GUUUUU CCAUAAAUAUU UUUGAGAG AAAAA U CA C AA A UC AG C G AACUAAU UG |
| Stem-loop sequence | AAAAGAGGAUAAAAAUGAAAAUGUUCAAAAAAAAGGGGUAAUUUUGAAAAGGGAUAUCUCAAAAAAGGUAUUUAUGAAAAAUUCUCAACUUUUUUCAUUGUAAAAAUAAUCAAGAGAGUUUGUUAUAAAUACCCUUUUUGGAAUACUCCUUUUCAAAAAUACCAAUUUUUUUUUGAACAUUUUCAUUUUUACCCUCUUUUAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GAFB01004830.1 |
|
2.5 | TSA: Camelina sativa Locus_1113_Transcript_1/9_Confidence_0.667_Length_1499 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| XM_010448246.2 |
|
2.5 | PREDICTED: Camelina sativa cell wall integrity and stress response component 3-like (LOC104729309), mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_010443859.2 |
|
2.5 | PREDICTED: Camelina sativa F-box protein At5g50450-like (LOC104725231), mRNA | NA | coding protein | psRNATarget |