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BaseInfo

ncRNA ID	novel_csa_miR140
Species	Camelina sativa
Class	miRNA
Genome position	Chr8:23743837-23743943 [-]
Reference genome	Cs
Source	SRR1736515
Length	22
Mature sequence(if miRNA)	1 - CUCGGACCAGGCUUCAUUCCCC - 22
Stem-loop(if miRNA)	--  U   UU      CU     -     A   AAAGGA CAUUCGAUAGAAAU   GG AUG  GUCUGG  CGAGG UCAUG AGG      U              U   || |||  ||||||  ||||| ||||| |||      |              U   CC UAC  CGGACC  GCUCU AGUAC UCC      G              G CC  U   UU      AG     U     A   -CACAA AAACAAGCAAGAAA
Stem-loop sequence	GGUAUGUUGUCUGGCUCGAGGUCAUGAAGGAAAGGAUCAUUCGAUAGAAAUUUGAAAGAACGAACAAAGAACACCCUACAUGAUUCUCGGACCAGGCUUCAUUCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010508707.1	ncRNA:22   CCCCUUACUUCGGACCAGGCUC   1   *||||||*|||||||||=|||| targets:600   UGGGAAUAAAGCCUGGUUCGAG   621 Target Full Sequence	2.5	PREDICTED: Camelina sativa uncharacterized LOC104783562 (LOC104783562), mRNA	NA	coding protein	psRNATarget
XM_010463750.2	ncRNA:22   CCCCUUACUUCGGACCAGGCUC   1   **||||||||||||||||||=* targets:338   CUGGAAUGAAGCCUGGUCCGGA   359 Target Full Sequence	2.5	PREDICTED: Camelina sativa homeobox-leucine zipper protein ATHB-15-like (LOC104742717), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010481412.2	ncRNA:22   CCCCUUACUUCGGACCAGGCUC   1   **||||||||||||||||||=* targets:1326   CUGGAAUGAAGCCUGGUCCGGA   1347 Target Full Sequence	2.5	PREDICTED: Camelina sativa homeobox-leucine zipper protein ATHB-15 (LOC104758530), mRNA	NA	coding protein	psRNATarget
XM_010463749.2	ncRNA:22   CCCCUUACUUCGGACCAGGCUC   1   **||||||||||||||||||=* targets:1379   CUGGAAUGAAGCCUGGUCCGGA   1400 Target Full Sequence	2.5	PREDICTED: Camelina sativa homeobox-leucine zipper protein ATHB-15-like (LOC104742717), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010502505.1	ncRNA:22   CCCCUUACUUCGGACCAGGCUC   1   **||||||||||||||||||=* targets:1407   CUGGAAUGAAGCCUGGUCCGGA   1428 Target Full Sequence	2.5	PREDICTED: Camelina sativa homeobox-leucine zipper protein ATHB-15-like (LOC104778134), mRNA	NA	coding protein	psRNATarget